Journal Articles

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    Antibiotic and Heavy Metal Resistance in Bacteria from Contaminated Agricultural Soil: Insights from a New Zealand Airstrip
    (MDPI (Basel, Switzerland), 2025-02) Heydari A; Kim ND; Biggs PJ; Horswell J; Gielen GJHP; Siggins A; Bromhead C; Meza-Alvarado JC; Palmer BR; Abia ALK
    BACKGROUND/OBJECTIVES: Agricultural soils accumulate inorganic contaminants from the application of phosphate fertilisers. An airstrip located at Belmont Regional Park (BRP), near Wellington, New Zealand, has been found to have a gradient of cadmium contamination due to spillage of superphosphate fertiliser. METHODS: Soil samples from the BRP airstrip with a gradient of cadmium contamination, were used as a novel source to explore bacterial communities' resistance to heavy metals (HMs) and any co-selected antibiotic (Ab) resistance. RESULTS: Differences between BRP soil samples with higher levels of HMs compared to those with lower HM concentrations showed significantly more bacterial isolates resistant to both HMs (40.6% versus 63.1% resistant to 0.01 mM CdCl2, p < 0.05) and Abs (23.4% versus 37.8% resistant to 20 μg/mL tetracycline, p < 0.05) in soils with higher initial levels of HMs (1.14 versus 7.20 mg kg-1 Cd). Terminal restriction fragment length polymorphism (TRFLP) and 16S rDNA next-generation sequencing profiling investigated changes in HM-induced bacterial communities. Significant differences were observed among the bacterial community structures in the selected BRP soil samples. Conjugative transfer of cadmium resistance from 23-38% of cadmium-resistant isolates to a characterised recipient bacterial strain in vitro suggested many of these genes were carried by mobile genetic elements. Transconjugants were also resistant to zinc, mercury, and Abs. Higher levels of HMs in soil correlated with increased resistance to HMs, Abs, and elevated levels of HMs thus disturbed the bacterial community structure in BRP soil significantly. CONCLUSIONS: These findings suggest that HM contamination of agricultural soil can select for Ab resistance in soil bacteria with potential risks to human and animal health.
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    Effects of selected emerging contaminants found in wastewater on antimicrobial resistance and horizontal gene transfer
    (Elsevier B.V., 2023-08-29) van Hamelsveld S; Jamali-Behnam F; Alderton I; Kurenbach B; McCabe AW; Palmer BR; Gutiérrez-Ginés MJ; Weaver L; Horswell J; Tremblay LA; Heinemann JA
    The widespread use of emerging contaminants (ECs) may be compounding the problem of antibiotic resistance. Various non-antibiotic pollutants have been shown to alter bacterial responses to antibiotics and increase horizontal transfer of antimicrobial resistance (AMR) genes. ECs include components of medicines, foods, disinfectants, personal care products and agrichemicals. ECs concentrate in some environments such as in wastewater, where the pollutants and pathogenic microorganisms mix. We investigated the effects on antibiotic resistance and gene transfer of nine ECs and one commercial product formulation (Roundup). We used the bacterium Salmonella enterica serovar Typhimurium and the antibiotics ampicillin and gentamicin as indicators of the effects of antibiotic-EC co-exposures. We measured intra- (Escherichia coli) and interspecies (E. coli x S. enterica) conjugation frequencies during exposure to ECs. Interestingly, the observed effect could change at different antibiotic concentrations. Exposures to increasing concentrations of ECs was associated with increased conjugative transmission within species, but rarely increased interspecies transmission. We report the first test ever of clotrimazole on AMR and horizontal gene transfer and a newly described effect of dimethyl sulfoxide (DMSO), often used as a solvent for organic compounds.
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    The role of emerging organic contaminants in the development of antimicrobial resistance
    (KeAi Communications Co. Ltd. Publishing services by Elsevier BV on behalf of KeAi Communications Co Ltd, 2021-08-05) Alderton I; Palmer BR; Heinemann JA; Pattis I; Weaver L; Gutiérrez-Ginés MJ; Horswell J; Tremblay LA
    Antimicrobial resistance (AMR) threatens human and ecological health worldwide. Unless major changes occur across the human, animal and environmental sectors, the problem will continue to expand. An important component of AMR that deserves greater attention is the influence of emerging organic contaminants (EOCs) – ubiquitous compounds found, amongst others, in pharmaceuticals, personal care products, food, industrial and agricultural products, plastics and building materials. EOCs are widely used and can accumulate in the environment from varied sources, predominantly via waste streams. EOCs can interact with microbial communities potentially leading to the emergence and spread of AMR. Biocides and pharmaceuticals have been demonstrated to promote AMR development. Antimicrobial resistance is a multi-faceted problem that requires input from all sectors, with robust strategies and policies needed to make headway with solving the issues of this important threat.
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    Co-selection of Heavy Metal and Antibiotic Resistance in Soil Bacteria from Agricultural Soils in New Zealand
    (MDPI (Basel, Switzerland), 2022-02-04) Heydari A; Kim ND; Horswell J; Gielen G; Siggins A; Taylor M; Bromhead C; Palmer BR
    Accumulation of trace elements (including heavy metals) in soil from usage of superphos-phate fertilisers induces resistance of soil bacteria to trace elements of environmental concern (TE-oEC) and may co‐select for resistance to antibiotics (Ab). This study aimed to investigate selection of co‐resistance of soil bacteria to Cd, Zn and Hg, and Ab in soils with varied management histories. Genetic diversity of these bacteria and horizontal transfer of Cd resistance genes (cadA and czcA) were also investigated. Soils with either pastoral and arable management histories and either high levels of Cd and Zn, or indigenous bush with background levels of these TEoEC from the Waikato region, New Zealand were sampled. Plate culturing with a range of TEoEC and Ab concentrations, Pollution Induced Community Tolerance (PICT) assay, antibiotic sensitivity, terminal restriction fragment length polymorphism (TRFLP) and horizontal gene transfer (HGT) analyses were em-ployed to investigate co‐selection of TEoEC and Ab resistance. Higher levels of bacterial resistance to TEoEC and Ab correlated with higher levels of TEoEC in soil. Bacterial community structures were altered in soils with high TEoEC levels. Cd resistance genes were transferred from donor bacterial isolates, to recipients and the transconjugants also had resistance to Zn and/or Hg and a range of Ab.