Browsing by Author "Wang Y"
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- ItemA novel Bayesian Latent Class Model (BLCM) evaluates multiple continuous and binary tests: A case study for Brucella abortus in dairy cattle.(Elsevier B.V., 2024-03-01) Wang Y; Vallée E; Compton C; Heuer C; Guo A; Wang Y; Zhang Z; Vignes MBovine brucellosis, primarily caused by Brucella abortus, severely affects both animal health and human well-being. Accurate diagnosis is crucial for designing informed control and prevention measures. Lacking a gold standard test makes it challenging to determine optimal cut-off values and evaluate the diagnostic performance of tests. In this study, we developed a novel Bayesian Latent Class Model that integrates both binary and continuous testing outcomes, incorporating additional fixed (parity) and random (farm) effects, to calibrate optimal cut-off values by maximizing Youden Index. We tested 651 serum samples collected from six dairy farms in two regions of Henan Province, China with four serological tests: Rose Bengal Test, Serum Agglutination Test, Fluorescence Polarization Assay, and Competitive Enzyme-Linked Immunosorbent Assay. Our analysis revealed that the optimal cut-off values for FPA and C-ELISA were 94.2 mP and 0.403 PI, respectively. Sensitivity estimates for the four tests ranged from 69.7% to 89.9%, while specificity estimates varied between 97.1% and 99.6%. The true prevalences in the two study regions in Henan province were 4.7% and 30.3%. Parity-specific odds ratios for positive serological status ranged from 1.2 to 2.2 for different parity groups compared to primiparous cows. This approach provides a robust framework for validating diagnostic tests for both continuous and discrete tests in the absence of a gold standard test. Our findings can enhance our ability to design targeted disease detection strategies and implement effective control measures for brucellosis in Chinese dairy farms.
- ItemA scoping review on the epidemiology and public significance of Brucella abortus in Chinese dairy cattle and humans(Elsevier B.V., 2024-01-31) Wang Y; Vallée E; Heuer C; Wang Y; Guo A; Zhang Z; Compton CBrucellosis, caused by Brucella spp., is a re-emerging One Health disease with increased prevalence and incidence in Chinese dairy cattle and humans, severely affecting animal productivity and public health. In dairy cattle, B. abortus is the primary causative agent although infections with other Brucella species occur occasionally. However, the epidemiological and comparative importance of B. abortus in dairy cattle and humans remains inadequately understood throughout China due to the heterogeneity in locations, quality, and study methods. This scoping review aims to describe the changing status of B. abortus infection in dairy cattle and humans, investigate the circulating Brucella species and biovars, and identify factors driving the disease transmission by retrieving publicly accessible literature from four databases. After passing the prespecified inclusion criteria, 60 original articles were included in the final synthesis. Although the reported animal-level and farm-level prevalence of brucellosis in dairy cattle was lower compared to other endemic countries (e.g. Iran and India), it has been reported to increase over the last decade. The incidence of brucellosis in humans displayed seasonal increases. The Rose Bengal Test and Serum Agglutination Test, interpreted in series, were the most used serological test to diagnose Brucella spp. in dairy cattle and humans. B. abortus biovar 3 was the predominant species (81.9%) and biovar (70.3%) in dairy cattle, and B. melitensis biovar 3 was identified as the most commonly detected strain in human brucellosis cases. These strains were mainly clustered in Inner Mongolia and Shannxi Province (75.7%), limiting the generalizability of the results to other provinces. Live cattle movement or trade was identified as the key factor driving brucellosis transmission, but its transmission pattern remains unknown within the Chinese dairy sector. These knowledge gaps require a more effective One Health approach to be bridged. A coordinated and evidence-based research program is essential to inform regional or national control strategies that are both feasible and economical in the Chinese context.
- ItemAn analysis of binary microlensing event OGLE-2015-BLG-0060(Oxford University Press on behalf of the Royal Astronomical Society, 2019-08) Tsapras Y; Cassan A; Ranc C; Bachelet E; Street R; Udalski A; Hundertmark M; Bozza V; Beaulieu JP; Marquette JB; Euteneuer E; Bramich DM; Dominik M; Figuera Jaimes R; Horne K; Mao S; Menzies J; Schmidt R; Snodgrass C; Steele IA; Wambsganss J; Mróz P; Szymański MK; Soszyński I; Skowron J; Pietrukowicz P; Kozłowski S; Poleski R; Ulaczyk K; Pawlak M; Jørgensen UG; Skottfelt J; Popovas A; Ciceri S; Korhonen H; Kuffmeier M; Evans DF; Peixinho N; Hinse TC; Burgdorf MJ; Southworth J; Tronsgaard R; Kerins E; Andersen MI; Rahvar S; Wang Y; Wertz O; Rabus M; Calchi Novati S; D'Ago G; Scarpetta G; Mancini L; Abe F; Asakura Y; Bennett DP; Bhattacharya A; Donachie M; Evans P; Fukui A; Hirao Y; Itow Y; Kawasaki K; Koshimoto N; Li MCA; Ling CH; Masuda K; Matsubara Y; Muraki Y; Miyazaki S; Nagakane M; Ohnishi K; Rattenbury N; Saito T; Sharan A; Shibai H; Sullivan DJ; Sumi T; Suzuki D; Tristram PJ; Yamada T; Yonehara A; The RoboNet team; The OGLE collaboration; The MiNDSTEp collaboration; The MOA collaborationWe present the analysis of stellar binary microlensing event OGLE-2015-BLG-0060 based on observations obtained from 13 different telescopes. Intensive coverage of the anomalous parts of the light curve was achieved by automated follow-up observations from the robotic telescopes of the Las Cumbres Observatory. We show that, for the first time, all main features of an anomalous microlensing event are well covered by follow-up data, allowing us to estimate the physical parameters of the lens. The strong detection of second-order effects in the event light curve necessitates the inclusion of longer-baseline survey data in order to constrain the parallax vector. We find that the event was most likely caused by a stellar binary-lens with masses M = 0.87 pm 0.12 mathrm{M} and M = 0.77 pm 0.11 mathrm{M}. The distance to the lensing system is 6.41 ± 0.14 kpc and the projected separation between the two components is 13.85 ± 0.16 au. Alternative interpretations are also considered.
- ItemAn Evaluation of Mandarin Learning Apps Designed for English Speaking Pre-schoolers(Association for the Advancement of Computing in Education (AACE), 2019-09) Neumann M; Wang Y; Qi GY; Neumann DTouch screen tablets such as iPads are becoming increasingly popular as educational tools to support children’s first language learning in pre-schools. Apps can also be used to support early learning of a second language in English-speaking countries. However, little work has been done to evaluate these apps. The present research developed criteria for assessing Mandarin learning apps and applied them to evaluate 28 Mandarin apps for English-speaking pre-schoolers. The criteria included the domains of interactivity, usability, cultural awareness, collaboration, language and literacy content, and learning outcomes. The application of the criteria showed that half the Mandarin learning apps lacked key educational features essential for second language learning. The categories in which the apps scored most highly were interactivity, cultural awareness, usability, and language and literacy content. The apps scored lowest in the categories of collaboration and provision of learning outcomes. The findings suggest that further research is needed to inform best practice, app design, and to provide guidelines that help teachers select quality apps to support second language learning.
- ItemAssessing the win-win situation of forage production and soil organic carbon through a short-term active restoration strategy in alpine grasslands(Frontiers Media S.A., 2024-01-11) Wang Y; Wang Z; Kang Y; Zhang Z; Bao D; Sun X; Su JINTRODUCTION: Grassland degradation has seriously affected the ecological environment and human livelihood. To abate these, implementing effective management strategies to restore and improve the service functions and productivity of degraded grasslands is crucial. METHODS: To evaluate the influences of restoration measures combined with different grazing intensities on short-term (1 year) grassland restoration, the changes in soil physicochemical properties, as well as plant traits under restoration measures of different grazing intensities, reseeding, and fertilization, were analyzed. RESULTS: Soil organic carbon (SOC) increased to varying degrees, whereas available nutrients decreased under all combined restoration measures. Reseeding, alone and in combination with fertilization, substantially increased SOC, improved grassland vegetation status, and enhanced grassland productivity. The aboveground biomass of Gramineae and the total aboveground biomass increased under the combined restoration measures of transferring livestock out of the pasture 45 days in advance, reseeding, and fertilization (T4). Redundancy analysis revealed a strong correlation between grassland vegetation characteristics, SOC, and available potassium. Considering soil and vegetation factors, the short-term results suggested that the combination measures in T4had the most marked positive impact on grassland restoration. DISCUSSION: These findings offer valuable theoretical insights for the ecological restoration of degraded grasslands in alpine regions.
- ItemCell Wall Carbohydrate Dynamics during the Differentiation of Infection Structures by the Apple Scab Fungus, Venturia inaequalis(American Society for Microbiology, 2023-06-15) Rocafort M; Srivastava V; Bowen J; Díaz-Moreno SM; Guo Y; Bulone V; Plummer KM; Sutherland PW; Anderson MA; Bradshaw RE; Mesarich CH; Wang YScab, caused by the biotrophic fungal pathogen Venturia inaequalis, is the most economically important disease of apples. During infection, V. inaequalis colonizes the subcuticular host environment, where it develops specialized infection structures called runner hyphae and stromata. These structures are thought to be involved in nutrient acquisition and effector (virulence factor) delivery, but also give rise to conidia that further the infection cycle. Despite their importance, very little is known about how these structures are differentiated. Likewise, nothing is known about how these structures are protected from host defenses or recognition by the host immune system. To better understand these processes, we first performed a glycosidic linkage analysis of sporulating tubular hyphae from V. inaequalis developed in culture. This analysis revealed that the V. inaequalis cell wall is mostly composed of glucans (44%) and mannans (37%), whereas chitin represents a much smaller proportion (4%). Next, we used transcriptomics and confocal laser scanning microscopy to provide insights into the cell wall carbohydrate composition of runner hyphae and stromata. These analyses revealed that, during subcuticular host colonization, genes of V. inaequalis putatively associated with the biosynthesis of immunogenic carbohydrates, such as chitin and b-1,6-glucan, are downregulated relative to growth in culture, while on the surface of runner hyphae and stromata, chitin is deacetylated to the less-immunogenic carbohydrate chitosan. These changes are anticipated to enable the subcuticular differentiation of runner hyphae and stromata by V. inaequalis, as well as to protect these structures from host defenses and recognition by the host immune system. IMPORTANCE Plant-pathogenic fungi are a major threat to food security. Among these are subcuticular pathogens, which often cause latent asymptomatic infections, making them difficult to control. A key feature of these pathogens is their ability to differentiate specialized subcuticular infection structures that, to date, remain largely understudied. This is typified by Venturia inaequalis, which causes scab, the most economically important disease of apples. In this study, we show that, during subcuticular host colonization, V. inaequalis downregulates genes associated with the biosynthesis of two immunogenic cell wall carbohydrates, chitin and b-1,6-glucan, and coats its subcuticular infection structures with a less-immunogenic carbohydrate, chitosan. These changes are anticipated to enable host colonization by V. inaequalis and provide a foundation for understanding subcuticular host colonization by other plant-pathogenic fungi. Such an understanding is important, as it may inform the development of novel control strategies against subcuticular plant-pathogenic fungi.
- ItemChallenges and responses: A Complex Dynamic Systems approach to exploring language teacher agency in a blended classroom(Castledown Publishers, 12/04/2022) Qi GY; Wang YThis is a qualitative examination of how a Chinese language teacher responded to challenges and developed her agency in a unique teaching and learning environment, termed as the blended classroom. The uniqueness of this classroom lies in its attendance by two cohorts of students at the same time – the face-to-face and the online groups. The online group joined the face-to-face group and the teacher via a synchronous online classroom called Blackboard Collaborate. Through analysing data from the teacher’s reflection, face-to-face and email interviews and the recordings of her blended class, this research unfolds a semester-long trajectory of her agency development in the blended classroom. Guided by the Complex Dynamic Systems Theory (CDST), we conclude that teacher agency is a system composed of multi-layers of subsystems and it is a product of the constant interaction amongst these interconnected and interdependent subsystems, with certain subsystems playing a more dominant role than others at a given stage of one’s agency development. This finding led to our proposal of a framework of teacher agency system. This research advances our understanding of teacher agency as a system in the context of online and blended learning.
- ItemCharacterization of two conserved cell death elicitor families from the Dothideomycete fungal pathogens Dothistroma septosporum and Fulvia fulva (syn. Cladosporium fulvum)(Frontiers Media S.A., 2022-09-08) Tarallo M; McDougal RL; Chen Z; Wang Y; Bradshaw RE; Mesarich CH; Wang YDothistroma septosporum (Ds) and Fulvia fulva (Ff; previously called Cladosporium fulvum) are two closely related Dothideomycete fungal species that cause Dothistroma needle blight in pine and leaf mold in tomato, respectively. During host colonization, these pathogens secrete virulence factors termed effectors to promote infection. In the presence of corresponding host immune receptors, however, these effectors activate plant defenses, including a localized cell death response that halts pathogen growth. We identified two apoplastic effector protein families, Ecp20 and Ecp32, which are conserved between the two pathogens. The Ecp20 family has four paralogues in both species, while the Ecp32 family has four paralogues in D. septosporum and five in F. fulva. Both families have members that are highly expressed during host infection. Members of the Ecp20 family have predicted structural similarity to proteins with a β-barrel fold, including the Alt a 1 allergen from Alternaria alternata, while members of the Ecp32 family have predicted structural similarity to proteins with a β-trefoil fold, such as trypsin inhibitors and lectins. Using Agrobacterium tumefaciens-mediated transient transformation assays, each family member was assessed for its ability to trigger cell death in leaves of the non-host species Nicotiana benthamiana and N. tabacum. Using this approach, FfEcp20-2, DsEcp20-3, and FfEcp20-3 from the Ecp20 family, and all members from the Ecp32 family, except for the Ds/FfEcp32-4 pair, triggered cell death in both species. This cell death was dependent on secretion of the effectors to the apoplast. In line with recognition by an extracellular immune receptor, cell death triggered by Ds/FfEcp20-3 and FfEcp32-3 was compromised in N. benthamiana silenced for BAK1 or SOBIR1, which encode extracellular co-receptors involved in transducing defense response signals following apoplastic effector recognition. We then investigated whether DsEcp20-3 and DsEcp20-4 triggered cell death in the host species Pinus radiata by directly infiltrating purified protein into pine needles. Strikingly, as in the non-host species, DsEcp20-3 triggered cell death, while DsEcp20-4 did not. Collectively, our study describes two new candidate effector families with cell death-eliciting activity from D. septosporum and F. fulva and provides evidence that members of these families are recognized by plant immune receptors.
- ItemEffect of Substrate and Thickness on the Photoconductivity of Nanoparticle Titanium Dioxide Thin Film Vacuum Ultraviolet Photoconductive Detector(MDPI (Basel, Switzerland), 2022-01) Cadatal-Raduban M; Kato T; Horiuchi Y; Olejníček J; Kohout M; Yamanoi K; Ono S; Selim F; Wang YVacuum ultraviolet radiation (VUV, from 100 nm to 200 nm wavelength) is indispensable in many applications, but its detection is still challenging. We report the development of a VUV photoconductive detector, based on titanium dioxide (TiO2) nanoparticle thin films. The effect of crystallinity, optical quality, and crystallite size due to film thickness (80 nm, 500 nm, 1000 nm) and type of substrate (silicon Si, quartz SiO2, soda lime glass SLG) was investigated to explore ways of enhancing the photoconductivity of the detector. The TiO2 film deposited on SiO2 substrate with a film thickness of 80 nm exhibited the best photoconductivity, with a photocurrent of 5.35 milli-Amperes and a photosensitivity of 99.99% for a bias voltage of 70 V. The wavelength response of the detector can be adjusted by changing the thickness of the film as the cut-off shifts to a longer wavelength, as the film becomes thicker. The response time of the TiO2 detector is about 5.8 μs and is comparable to the 5.4 μs response time of a diamond UV sensor. The development of the TiO2 nanoparticle thin film detector is expected to contribute to the enhancement of the use of VUV radiation in an increasing number of important technological and scientific applications.
- ItemExamining the generalizability of research findings from archival data(PNAS, 2022-07-26) Delios A; Clemente EG; Wu T; Tan H; Wang Y; Gordon M; Viganola D; Chen Z; Dreber A; Johannesson M; Pfeiffer T; Generalizability Tests Forecasting Collaboration; Uhlmann ELThis initiative examined systematically the extent to which a large set of archival research findings generalizes across contexts. We repeated the key analyses for 29 original strategic management effects in the same context (direct reproduction) as well as in 52 novel time periods and geographies; 45% of the reproductions returned results matching the original reports together with 55% of tests in different spans of years and 40% of tests in novel geographies. Some original findings were associated with multiple new tests. Reproducibility was the best predictor of generalizability—for the findings that proved directly reproducible, 84% emerged in other available time periods and 57% emerged in other geographies. Overall, only limited empirical evidence emerged for context sensitivity. In a forecasting survey, independent scientists were able to anticipate which effects would find support in tests in new samples.
- ItemExperimental Performance of a Solar Air Collector with a Perforated Back Plate in New Zealand(MDPI AG, 18/03/2020) Wang Y; Boulic M; Phipps R; Plagmann M; Cunningham CThis study investigates the thermal efficiency of a solar air heater (SAH), when it was mounted on a custom-made support frame, and was operated under different air mass flow rate. This SAH is composed of a transparent polycarbonate cover plate, a felt absorber layer, a perforated aluminium back plate and an aluminium frame. The ambient inlet air of this SAH is heated as it passes through the perforated back plate and over the felt absorber layer. The heated air is blown out through the outlet. Studies of SAHs with a similar design to this SAH were not found in the literature. The experiment was carried out at Massey University, Auckland campus, NZ (36.7◦ S, 174.7◦ E). The global horizontal solar irradiance, the ambient temperature and the wind speed were recorded using an on-site weather station. Temperature and velocity of the air at the outlet were measured using a hot wire anemometer. During the experiment, the air mass flow rate was between 0.022 ± 0.001 kg/s and 0.056 ± 0.005 kg/s. Results showed that when the SAH was operated at the airflow between 0.0054 kg/s and 0.0058 kg/s, the inlet air temperature and the wind speed (between 0 and 6.0 m/s) did not impact the temperature difference between the outlet air and the inlet air. The thermal efficiency of the SAH increased from 34 ± 5% at the airflow between 0.021 kg/s and 0.023 kg/s, to 47 ± 6% at the airflow ranging from 0.032 kg/s to 0.038 kg/s, to 71 ± 4% at the airflow of 0.056 ± 0.005 kg/s. The maximum thermal efficiency of 75% was obtained at the airflow of 0.057 kg/s. The effective efficiency of the SAH was 32 ± 5% at the airflow between 0.021 kg/s and 0.023 kg/s, 42 ± 6% at the airflow ranging from 0.032 kg/s to 0.038 kg/s, and 46 ± 11% at the airflow of 0.056 ± 0.005 kg/s.
- ItemFabrication of high-concentration Cu-doped deuterated targets for fast ignition experiments(IOP Publishing Ltd on behalf of the International Atomic Energy Agency (IAEA), 2023-01) Ikeda T; Kaneyasu Y; Hosokawa H; Shigemori K; Norimastu T; Cadatal-Raduban M; Nagai K; Kojima S; Abe Y; Miura E; Kitagawa Y; Takemura M; Wang Y; Dun J; Guo S; Asano S; Takizawa R; Fujioka S; Shiraga H; Arikawa Y; Ozaki T; Iwamoto A; Sakagami H; Sawada H; Mori Y; Yamanoi KIn high-energy-density physics, including inertial fusion energy using high-power lasers, doping tracer atoms and deuteration of target materials play an important role in diagnosis. For example, a low-concentration Cu dopant acts as an x-ray source for electron temperature detection while a deuterium dopant acts as a neutron source for fusion reaction detection. However, the simultaneous achievement of Cu doping, a deuterated polymer, mechanical toughness and chemical robustness during the fabrication process is not so simple. In this study, we report the successful fabrication of a Cu-doped deuterated target. The obtained samples were characterized by inductively coupled plasma optical emission spectrometry, differential scanning calorimetry and Fourier transform infrared spectroscopy. Simultaneous measurements of Cu K-shell x-ray emission and beam fusion neutrons were demonstrated using a petawatt laser at Osaka University.
- ItemFungi regulate the response of the N2O production process to warming and grazing in a Tibetan grassland(Copernicus Publications on behalf of the European Geosciences Union, 2018-07-20) Zhong L; Wang S; Xu X; Wang Y; Rui Y; Zhou X; Shen Q; Wang J; Jiang L; Luo C; Gu T; Ma W; Chen G; Kuzyakov YLack of understanding of the effects of warming and winter grazing on soil fungal contribution to the nitrous oxide (N2O) production process has limited our ability to predict N2O fluxes under changes in climate and land use management, because soil fungi play an important role in driving terrestrial N cycling. A controlled warming and winter grazing experiment that included control (C), winter grazing (G), warming (W) and warming with winter grazing (WG) was conducted to investigate the effects of warming and winter grazing on soil N2O production potential in an alpine meadow on the Tibetan Plateau. Our results showed that soil bacteria and fungi contributed 46 ± 2% and 54 ± 2% to nitrification, and 37 ± 3% and 63 ± 3% to denitrification in the control treatment, respectively. We conclude that soil fungi could be the main source of N2O production potential for the Tibetan alpine grasslands. In our results, neither warming nor winter grazing affected the activity of enzymes responsible for overall nitrification and denitrification. However, warming significantly increased the enzyme activity of bacterial nitrification and potential of N2O production from denitrification to 53 ± 2% and 55 ± 3%, respectively, but decreased them to 47 ± 2% and 45 ± 3%, respectively. Winter grazing had no such effects. Warming and winter grazing may not affect the soil N2O production potential, but climate warming can alter biotic pathways responsible for N2O production process. These findings confirm the importance of soil fungi in the soil N2O production process and how they respond to environmental and land use changes in alpine meadow ecosystems. Therefore, our results provide some new insights into ecological controls on the N2O production process and contribute to the development of an ecosystem nitrogen cycle model.
- ItemHimalayan Marmot (Marmota himalayana) Redistribution to High Latitudes under Climate Change(MDPI (Basel, Switzerland), 2023-08-28) Wang Z; Kang Y; Wang Y; Tan Y; Yao B; An K; Su J; Crowther MClimate warming and human activities impact the expansion and contraction of species distribution. The Himalayan marmot (Marmota himalayana) is a unique mammal and an ecosystem engineer in the Qinghai-Tibet Plateau (QTP). This pest aggravates grassland degradation and is a carrier and transmitter of plagues. Therefore, exploring the future distribution of Himalayan marmots based on climate change and human activities is crucial for ecosystem management, biodiversity conservation, and public health safety. Here, a maximum entropy model was explored to forecast changes in the distribution and centroid migration of the Himalayan marmot in the 2050s and 2070s. The results implied that the human footprint index (72.80%) and altitude (16.40%) were the crucial environmental factors affecting the potential distribution of Himalayan marmots, with moderately covered grassland being the preferred habitat of the Himalayan marmot. Over the next 30-50 years, the area of suitable habitat for the Himalayan marmot will increase slightly and the distribution center will shift towards higher latitudes in the northeastern part of the plateau. These results demonstrate the influence of climate change on Himalayan marmots and provide a theoretical reference for ecological management and plague monitoring.
- ItemIncreased precipitation enhances soil respiration in a semi-arid grassland on the Loess Plateau, China(PeerJ Inc., 2021-02-02) Wang Y; Xie Y; Rapson G; Ma H; Jing L; Zhang Y; Zhang J; Li J; Zhu BBACKGROUND: Precipitation influences the vulnerability of grassland ecosystems, especially upland grasslands, and soil respiration is critical for carbon cycling in arid grassland ecosystems which typically experience more droughty conditions. METHODS: We used three precipitation treatments to understand the effect of precipitation on soil respiration of a typical arid steppe in the Loess Plateau in north-western China. Precipitation was captured and relocated to simulate precipitation rates of 50%, 100%, and 150% of ambient precipitation. RESULTS AND DISCUSSION: Soil moisture was influenced by all precipitation treatments. Shoot biomass was greater, though non-significantly, as precipitation increased. However, both increase and decrease of precipitation significantly reduced root biomass. There was a positive linear relationship between soil moisture and soil respiration in the study area during the summer (July and August), when most precipitation fell. Soil moisture, soil root biomass, pH, and fungal diversity were predictors of soil respiration based on partial least squares regression, and soil moisture was the best of these. CONCLUSION: Our study highlights the importance of increased precipitation on soil respiration in drylands. Precipitation changes can cause significant alterations in soil properties, microbial fungi, and root biomass, and any surplus or transpired moisture is fed back into the climate, thereby affecting the rate of soil respiration in the future.
- ItemInvestigation on in-situ deoxygenation performance of bio-oil model compound guaiacol over Ce-Fe/Al2O3 catalyst(Elsevier B V on behalf of Shandong University, 2023-06-15) Yang M; Chen Y; Wang Y; Yang L; Cui W; Liu Y; Wang C; Chen QThe investigation of the low-cost deoxygenation of guaiacol (GUA, a model bio-oil compound) is of importance for upgrading bio-oil. At present, common sulfide catalysts for GUA deoxygenation reactions cause contamination of the liquid product, and noble metal catalysts are economically disadvantageous. In this study, four reduced Fe-based oxides with different Ce doping ratios were prepared and their effects on the in-situ deoxygenation performance of GUA in aqueous/methanol hydrogen donor solvents were explored. The results based on the deoxygenation degree, conversion degree, and higher heating value (HHV) of the products showed that the oxide catalyst with a Fe/Ce molar ratio of 2:1 in the methanol solvent performed very well. After selecting an excellent catalyst and a better hydrogen donor solvent, four factors (reaction temperature, reaction time, volume ratio of GUA dosage and methanol dosage, and the ratio of catalyst dosage at the bottom of the reactor to that at the top) in the deoxygenation degree of GUA were investigated using an orthogonal experimental method to further explore the performance of the catalyst. The results showed that the reaction temperature and time greatly influenced GUA deoxygenation. Under optimal experimental conditions, the deoxygenation degree and conversion degree of GUA could reach 34.36% and 92.56%, respectively, based on the relative peak area of gas chromatography–mass spectrometry, and the HHV of the liquid product was 32.27 MJ/kg. Although Fe/Ce catalysts mainly promote demethoxylation, demethylation, and methylation, the stability and quality of the liquid products were improved compared with GUA owing to the reduction in phenolic hydroxyl and ether content. The reduced catalyst in the process of GUA in-situ deoxygenation reactions in methanol maintained a steady performance, as revealed by X-ray diffraction and X-ray fluorescence.
- ItemMolecular Detection of Zoonotic and Veterinary Pathogenic Bacteria in Pet Dogs and Their Parasitizing Ticks in Junggar Basin, North-Western China(Frontiers Media S.A., 2022-07) Guo J; Song S; Cao S; Sun Z; Zhou Q; Deng X; Zhao T; Chai Y; Zhu D; Chen C; Baryshnikov PI; Blair HT; Wang Z; Wang Y; Zhang HDespite the recognized epidemiological importance of ticks as vectors for pathogens that cause numerous zoonotic and veterinary diseases, data regarding the pathogens of pet dogs and their parasitic ticks in the Junggar Basin are scarce. In this study, a total of 178 blood samples and 436 parasitic ticks were collected from pet dogs in Junggar Basin, Xinjiang Uygur Autonomous Region (XUAR), north-western China. All ticks were identified as Rhipicephalus turanicus sensu stricto (s.s.) according to morphological and molecular characteristics. Rh. turanicus s.s. ticks were collected from pet dogs in China for the first time. Seven tick-borne pathogens, such as Ehrlichia chaffeensis, Anaplasma phagocytophilum, Rickettsia massiliae, Candidatus R. barbariae, Brucella spp., Rickettsia sibirica, and Anaplasma ovis, were detected from ticks, whereas the first five bacteria were detected from blood samples of dogs. Brucella spp. was the most predominant pathogen in both blood samples and ticks of pet dogs, with the detection rates of 16.29 and 16.74%, respectively. Moreover, 17 ticks and 1 blood sample were co-infected with two pathogens, and 1 tick was co-infected with three pathogens. This study provided molecular evidence for the occurrence of Anaplasma spp., Ehrlichia spp., Rickettsia spp., and Brucella spp. circulating in pet dogs and their parasitic ticks in Junggar Basin, north-western China. These findings extend our knowledge of the tick-borne pathogens in pet dogs and their parasitic ticks in Central Asia; therefore, further research on these pathogens and their role in human and animal diseases is required.
- ItemNational Leaders' Usage of Twitter in Response to COVID-19: A Sentiment Analysis(Frontiers Media S.A., 2021-09-08) Wang Y; Croucher SM; Pearson E; Nair PTwitter is a powerful tool for world leaders to disseminate public health information and to reach citizens. While Twitter, like other platforms, affords world leaders the opportunity to rapidly present information to citizens, the discourse is often politically framed. In this study, we analysed how leaders' of the Five Eyes intelligence sharing group use Twitter to frame the COVID-19 virus. Specifically, four research questions were explored: 1) How frequently did each leader tweet about COVID-19 in 2020? 2) Which frames emerged from tweet content of each leader regarding COVID-19? 3) What was the overall tweet valence of each leader regarding COVID-19? and 4) To what extent can leaders' future tweets be predicted by the data? We used natural language processing (NLP) and conducted sentiment analysis via Python to identify frames and to compare the leaders' messaging. Results showed that of the leaders, President Trump tweeted the most, with Prime Minister Morrison posting the least number of tweets. The majority of each leaders' tweets were positive, while President Trump had the most negative tweets. Predictive modelling of tweet behavior was highly accurate.
- ItemNatural Variation in Chromium Accumulation and the Development of Related EST-SSR Molecular Markers in Miscanthus sinensis(MDPI (Basel, Switzerland), 2024-07-05) Nie G; Liu A; Ghanizadeh H; Wang Y; Tang M; He J; Feng G; Huang L; Zhang X; Tani ESoil pollution by heavy metals is a serious environmental concern globally. Hexavalent (VI) chromium (Cr) is one of the main pollutants causing groundwater and soil heavy metal pollution. Miscanthus sinensis is a C4 perennial grass species with a high level of heavy metal tolerance. This species can effectively remove Cr from soils and maintain desirable biomass production under Cr stress. This research aimed to characterize and compare Cr accumulation in 58 genotypes of M. sinensis and to develop Expressed Sequence Tag–Simple Sequence Repeat (EST-SSR) markers associated with Cr tolerance. The results show that the pattern of translocation of Cr in plants differed among the 58 M. sinensis genotypes following treatment of 200 mg/L of Cr6+; however, in most genotypes, the Cr was primarily accumulated in roots. A total of 43,367 EST-SSRs were identified, and 88 EST-SSR primer pairs corresponding to candidate genes involved in Cr accumulation in M. sinensis were selected for validation. Subsequently, 170 polymorphic loci generated from 24 validated EST-SSRs were used for the population structure and marker–trait association analysis. Based on a general linear model (GLM), a total of 46 associations were identified (p < 0.05), with 14 EST-SSRs markers associated with target traits. Among them, four genes related to ABC transporters, wall-associated receptor kinases, as well as two high-affinity sulfate transporters (ST), were identified under Cr stress (p < 0.05). The results of this study help to accelerate the screening across M. sinensis genotypes for desirable traits under Cr stress and provide a platform for M. sinensis genetic improvement and molecular-marker-assisted breeding.
- ItemNon-additive QTL mapping of lactation traits in 124,000 cattle reveals novel recessive loci(BioMed Central Ltd, 2022-12) Reynolds EGM; Lopdell T; Wang Y; Tiplady KM; Harland CS; Johnson TJJ; Neeley C; Carnie K; Sherlock RG; Couldrey C; Davis SR; Harris BL; Spelman RJ; Garrick DJ; Littlejohn MDBACKGROUND: Deleterious recessive conditions have been primarily studied in the context of Mendelian diseases. Recently, several deleterious recessive mutations with large effects were discovered via non-additive genome-wide association studies (GWAS) of quantitative growth and developmental traits in cattle, which showed that quantitative traits can be used as proxies of genetic disorders when such traits are indicative of whole-animal health status. We reasoned that lactation traits in cattle might also reflect genetic disorders, given the increased energy demands of lactation and the substantial stresses imposed on the animal. In this study, we screened more than 124,000 cows for recessive effects based on lactation traits. RESULTS: We discovered five novel quantitative trait loci (QTL) that are associated with large recessive impacts on three milk yield traits, with these loci presenting missense variants in the DOCK8, IL4R, KIAA0556, and SLC25A4 genes or premature stop variants in the ITGAL, LRCH4, and RBM34 genes, as candidate causal mutations. For two milk composition traits, we identified several previously reported additive QTL that display small dominance effects. By contrasting results from milk yield and milk composition phenotypes, we note differing genetic architectures. Compared to milk composition phenotypes, milk yield phenotypes had lower heritabilities and were associated with fewer additive QTL but had a higher non-additive genetic variance and were associated with a higher proportion of loci exhibiting dominance. CONCLUSIONS: We identified large-effect recessive QTL which are segregating at surprisingly high frequencies in cattle. We speculate that the differences in genetic architecture between milk yield and milk composition phenotypes derive from underlying dissimilarities in the cellular and molecular representation of these traits, with yield phenotypes acting as a better proxy of underlying biological disorders through presentation of a larger number of major recessive impacts.