Journal Articles
Permanent URI for this collectionhttps://mro.massey.ac.nz/handle/10179/7915
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Item Increased growth rate post-weaning affects mammary gene expression of two-year-old ewes during their second pregnancy and lactation(Oxford University Press on behalf of the American Society of Animal Science., 2025-09-18) Haslin E; Herath HMGP; Pain SJ; Gedye KR; Sneddon NW; Wang B; Heiser A; Corner-Thomas RA; Kenyon PR; Morris ST; Blair HTThis study examined the long-term effects of increased growth rates between three and seven months of age on gene expression in the mammary gland of nondairy ewes during their second lactation. A total of 19 twin-bearing, two-year-old ewes that either had an increased growth rate between three and seven months of age (heavy; n = 9; 153 ± 2.2 g/d and 47.9 ± 0.38 kg at breeding) or did not have an increased growth rate (control; n = 10; 127 ± 1.9 g/d and 44.9 ± 0.49 kg at breeding) were selected. Mammary gland biopsies were collected at day 128 of pregnancy and day 30 of lactation to examine the expression of 37 genes involved in mammary cell development and milk fat metabolism using NanoString nCounter technology. Ewes in the heavy group tended to exhibit lower expression (P < 0.05) of acyl-CoA synthetase short-chain family member 1 (ACSS1), a gene critical for mitochondrial acetyl-CoA synthesis, energy production, and milk fat synthesis, and a trend toward (P = 0.11) lower expression of signal transducer and activator of transcription 5A (STAT5A), a regulator of mammary epithelial cell differentiation and survival. These lower expressions suggest potential carry-over effects of increased growth rate between three and seven months of age. However, no phenotypic differences were observed in lamb growth or live weight, and no differences were detected in the expression of downstream target genes or modulators of these pathways, suggesting limited functional impact on mammary gland development and lamb performance outcomes. Further investigations, including a functional assessment of lactation and use of comprehensive transcriptomic analyses, would be needed to understand the effects of increased growth rates between three and seven months of age on ewe mammary function and milk composition.Item Preferences in traits and management characteristics for dairy-beef animals from a survey of New Zealand farmers(Taylor and Francis Group on behalf of the Royal Society of New Zealand, 2025-05-19) Sneddon NW; Corner-Thomas RA; Kenyon PR; Brier DThere are three parties involved in the expansion of dairy-beef or beef-on-dairy within New Zealand, they are namely, beef breeders, dairy farmers and beef finishers. Within these three groups, there are different requirements for an animal within each those industries. In 2022, Beef + Lamb New Zealand conducted a survey to collect responses from 121 respondents across these 3 parties, to gauge farmer preferences. The survey contained questions relating to the management of young cattle from birth through to weaning or sale (depending on management practice), and then from weaning or purchase through to finishing. All farmers were asked what traits they selected for in bulls, and what they based purchasing decisions on. The results showed a series of trends, related to breed choice, price and perceived benefit to their farming system. Calves from dairy cattle that had some Jersey genetics were seen as a finishing risk and were less attractive to finishing operations. There appeared to be a disconnect between the preferences of dairy and beef finishing operations, with sire selection having opposite selection criteria. The results of this survey indicate that work needs to be taken to align the goals of both beef finishers and dairy farmers.Item Where do all the ewes go? Ewe culling and mortality in 34 sheep flocks in New Zealand.(Taylor and Francis Group, 2024-10-17) Ridler AL; Corner-Thomas RA; Mote S; Morgan S; Kenyon PR; Flay KJAims To describe rates of and reasons for culling and mortality of ewes between breeding and mid-lactation on New Zealand sheep farms; to investigate associations of these variables with farm demographic variables; and to describe rates of and reasons for culling of ewes at weaning. Methods Participants were a convenience sample of 34 farms from across New Zealand. Demographic data were initially collected for each farm via a questionnaire administered in-person to the flock owner or manager. During approximately 8 months from breeding to mid-lactation, ewe tally, culling and mortality data were collected and used to calculate various parameters related to flock performance and to investigate associations. During the main ewe-culling event at weaning, ewe-culling data were collected from 29/34 flocks participating in the study. Results There was considerable variation between flocks, but the between-flock mean replacement percentage was 29.2 (SD 5.0)%. Overall, a between-flock mean of 10.5 (SD 4.6)% of ewes presented for breeding were culled or dead/missing by mid-lactation and thus did not rear any lambs. Additionally, from 27 flocks that reported data on ewes’ success at rearing lambs, a between-flock mean of 3.9 (SD 2.5)% of ewes that remained alive at mid-lactation failed to rear any lambs, resulting in an overall between-flock mean loss of 23.1 (SD 6.3) potential lambs per 100 ewes. Two-thirds of ewe mortalities between breeding and mid-lactation occurred during the lambing period. Model results showed flocks with higher pregnancy scanning percentages had lower rates of culling and mortality between breeding and mid-lactation. However, apart from farm contour, from breeding to mid-lactation there were no associations for culling and mortality with farm size, flock size, number of ewes per labour unit, whether ewe hoggets (7–9 months of age) were presented for breeding, or duration of the breeding period. A between-flock mean of 16.5 (SD 8.3)% of ewes present at weaning were culled, and among mixed-age ewes, the most common reasons for culling at this time were age, incisor teeth defects and udder defects. Conclusions To reduce unnecessary ewe culling and mortality, attention should be focused on maximising conception rates, ensuring judicious culling decisions, optimising body condition score, and identifying farm-specific causes of death over the lambing period to facilitate targeted intervention strategies. Clinical relevance Identifying why and when ewes exit flocks, and comparing it with the data presented here, will facilitate the development of flock-specific interventions to reduce ewe culling and mortality.Item The Use of Triaxial Accelerometers and Machine Learning Algorithms for Behavioural Identification in Domestic Cats (Felis catus): A Validation Study(MDPI (Basel, Switzerland), 2023-08-14) Smit M; Ikurior SJ; Corner-Thomas RA; Andrews CJ; Draganova I; Thomas DG; Vanwanseele BAnimal behaviour can be an indicator of health and welfare. Monitoring behaviour through visual observation is labour-intensive and there is a risk of missing infrequent behaviours. Twelve healthy domestic shorthair cats were fitted with triaxial accelerometers mounted on a collar and harness. Over seven days, accelerometer and video footage were collected simultaneously. Identifier variables (n = 32) were calculated from the accelerometer data and summarized into 1 s epochs. Twenty-four behaviours were annotated from the video recordings and aligned with the summarised accelerometer data. Models were created using random forest (RF) and supervised self-organizing map (SOM) machine learning techniques for each mounting location. Multiple modelling rounds were run to select and merge behaviours based on performance values. All models were then tested on a validation accelerometer dataset from the same twelve cats to identify behaviours. The frequency of behaviours was calculated and compared using Dirichlet regression. Despite the SOM models having higher Kappa (>95%) and overall accuracy (>95%) compared with the RF models (64-76% and 70-86%, respectively), the RF models predicted behaviours more consistently between mounting locations. These results indicate that triaxial accelerometers can identify cat specific behaviours.Item Worms and welfare: Behavioural and physiological changes associated with gastrointestinal nematode parasitism in lambs.(Elsevier B.V., 2023-10-27) Hempstead MN; Waghorn TS; Gibson MJ; Sauermann CW; Ross AB; Cave VM; Sutherland MA; Marquetoux N; Hannaford R; Corner-Thomas RA; Sutherland IAParasitism with gastrointestinal nematodes (GIN) is a worldwide issue impacting negatively on animal production, health, and welfare. Therefore, early diagnostic signs of parasitism are required to allow for timely interventions. The objective of this study was to evaluate the behavioural and physiological changes in lambs associated with GIN infection. We used 30, 8-month-old Romney-cross wethers, that were administered anthelmintics until faecal egg counts (FEC) were zero and housed in an indoor facility. The study lasted 9 weeks, which comprised a 3-week pre-treatment, and a 6-week treatment phase. Lambs were randomly assigned to one of two treatments (n = 15/treatment) trickle-dosed with: 1) 1500 infective third stage larvae (L3) three days/week for 6 weeks (27,000 total L3; challenged), or 2) water 3 days/week for 6 weeks (control). Within each pen there were 5 pairs of lambs (balanced for liveweight), with each pair comprising a challenged and control lamb. Blood, faecal, and saliva samples were collected 1 week pre-treatment and weekly for 6 weeks of treatment. Behaviour was observed (e.g., feeding, lying, standing) from video-camera recordings using scan sampling every 5 min for 8 h, 1 day pre-treatment and on the day immediately prior to physiological sampling across the 6-week treatment phase (7 days in total). Accelerometers were attached to each lamb to continuously monitor behaviour from 3 weeks pre-treatment and for the remainder of the study. Liveweight, body condition, faecal soiling and faecal consistency scoring were performed weekly as was lipidomic analysis of plasma samples. From week 2 of treatment, challenged lambs spent less time feeding and more time lying than control lambs until week 5 of treatment (P ≤ 0.01). At week 3 of treatment, elevated lipids (mainly triglycerides and phospholipids), loose faeces and faecal soiling around the anus were observed in challenged lambs compared with controls (P ≤ 0.05). From week 4 of treatment, FEC were elevated in the challenged compared to control lambs (P ≤ 0.05). There was also lower liveweight gain at 4 and 5 weeks of treatment in the challenged lambs compared with control lambs (P ≤ 0.05). These results show a clear timeline of changes in behaviour (e.g., feeding and lying), lipids such as triglycerides, and digestive function (e.g., faecal soiling) suggestive of GIN subclinical disease, which show promise for use in future studies on early identification of subclinical GIN parasitism in lambs.Item Wool shedding and lamb fleece weights: first-cross and backcross Wiltshire–Romney sheep scored at lamb, hogget and two-tooth ages(Taylor and Francis Group, 2024-05-03) Sneddon NW; Handcock RC; Corner-Thomas RA; Kenyon PR; Burnham DL; Garrick DJ; Littlejohn MD; Blair HT; Morris STWith decreasing wool values, interest is increasing regarding shedding sheep. To investigate this, two long-term studies introducing Wiltshire genes into Romney flocks were initiated. Data from these two studies provide phenotypic relationships between a range of shedding scores at different ages. The data included shedding scores (on a 0–5 scale) repeated on lambs (∼5 months), hoggets (∼14–18 months) and two-tooths (∼27 months), and lamb fleece weights. Positive relationships between shedding scores on the same animals were observed. Lamb fleece weight was negatively correlated with all shedding scores. Lamb shedding score in February had a correlation of 0.54 (P < 0.001) with the February score as a hogget at Riverside farm. Scoring wool shedding is a laborious activity requiring individual animals to be scored in the shearing position. Therefore, lamb fleece weight was investigated for its relationship with shedding scores, as a potentially easier alternative. Lamb fleece weight had a greater correlation with February hogget shedding score than with the lamb shedding score (−0.76 vs −0.52, P < 0.001). This study indicated that February scores are an accurate predictor of future shedding phenotypes, and when used in conjunction with fleece weight, are a good predictor of phenotypes expressed at later ages.Item Ewe culling in New Zealand: an interview study of 38 farmers(Taylor and Francis Group, 2023-11-19) Ridler AL; Kenyon PR; Greer AW; Logan CM; Morgan S; Corner-Thomas RARemoval of ewes from a flock before the end of their productive life, sometimes described as ewe wastage, can potentially lead to reduced flock productivity. While the main reasons for culling ewes are largely known, their relative importance to New Zealand farmers and farmers’ rational behind their culling decisions are not. Therefore, this study involved semi-structured interviews with 38 sheep farmers from throughout New Zealand to explore their ewe culling decisions. Farmers consistently culled mixed-age and two-tooth ewes who failed to become pregnant or who had a vaginal prolapse. For other culling reasons, farmers’ use of them and their rationale for doing so was diverse and varied between farmers based on ewe age-group, severity, season, perceived economic consequences and farmers’ personal preference. This diversity indicates that there is scope for some farmers to carefully evaluate some of their culling decisions.Item The influence of the number of lambs present on the suckling behaviour of triplet-rearing ewes at pasture(Taylor and Francis Group, 2024-01-01) Corner-Thomas RA; Shanks R; Beausoleil NJ; Sneddon NThis study examined the suckling behaviour of triplet-rearing ewes for three days post-parturition. Twenty-six ewes were enrolled with 11 being observed for the entire 3-days post-lambing. The behaviour of the ewe, number of lambs present at the end of the event and the behaviour that terminated the event were recorded for each suckling event. The mean suckling event duration increased when additional lambs were present at the end of the suckling event. Ewes that had observations across all three days showed no change in the number of suckling events over time, but suckling events tended to be shorter on day 3 than on days 1 or 2. On day 1 more suckling events were terminated by the ewe walking away from her lambs than on days 2 and 3. The odds of a ewe walking away to terminate the suckling event were greater when three lambs were present compared with two. Ewes showed more inactive behaviours when more lambs were present at the end of the suckling event. The results partially supported the hypothesis that the ewe would be more likely to terminate a suckling event when three lambs were attempting to suck compared with one or two lambs.Item Should lambs born to one-year-old ewes and grown to heavy live weights be retained as replacements and mated at seven months of age?(Taylor & Francis Group, 2024-02-21) Haslin E; Kenyon PR; Corner-Thomas RA; Morris ST; Blair HTThe lifetime productivity and efficiency of singleton- and twin-born ewe lambs born to one-year-old ewes were compared with twin-born ewe lambs born to mixed-age ewes. Romney ewe lambs either born as twins to mixed-age ewes (Heavier n = 135 and Control n = 135), or to one-year-old ewes as singletons (L1; n = 135) or twins (L2; n = 88) were included. The Heavier ewes weighed 47.9 ± 0.36 kg at ewe lamb breeding while Control ewes weighed 44.9 ± 0.38 kg. The lifetime number of lambs born and weaned, and the lifetime weight of lambs weaned were used to calculate both feed and ewe efficiency. Heavier ewes had greater lamb production as one-year-old ewes than L1, L2 and Control ewes, after which the yearly lamb production and efficiency did not differ between treatments. Heavier ewes had a greater lifetime number and weight of lambs weaned than L1 and L2 ewes but did not differ from Control ewes. The lower lifetime production of L1 and L2 ewes was driven by their low production as one-year-old ewes. Farmers, therefore, could select their replacements from ewes born to one-year-old ewes and have similar lamb production to ewes born to mixed-age ewes, providing they reach recommended pre-breeding live weights.Item Factors Associated with Ewe Death and Casting in an Extensively Farmed Sheep Flock in New Zealand(MDPI (Basel, Switzerland), 2021-12) Capdevila-Ospina K; Corner-Thomas RA; Flay KJ; Kenyon PR; Ridler AL; Garcia Ispierto IEwe deaths affect the productivity and profitability in sheep farming systems and have potential animal welfare and market perception implications. Internationally, there is scant data on the timing and causes of ewe deaths in extensive grazing systems. There is no published literature on the incidence and risk factors associated with casting (ewe in late gestation accidentally immobilised, often in dorsal recumbency). This study, undertaken using a cohort of 1789 ewes on a New Zealand farm, reports on the timing and risk factors associated with production parameters for ewe deaths through an almost two-year period, along with causes of death during both peripartum periods. Ewe deaths occurred throughout both years but were most frequent during the peripartum (pre-lambing to mid-lactation) period. Casting was the most commonly identified cause of death in both years, responsible for approximately a quarter to a third of potential annual mortality. Few risk factors for death or casting were identified. In conclusion, the peripartum period is a high-risk time period for ewe deaths (and, by extension, will also contribute to lamb perinatal mortality). In extensively grazed flocks where casting events occur, it is recommended that all ewes are monitored daily during the peripartum period.